Bioconductor Adjusted pvalue

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1.4k

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pvalue adjusted pvalue fdrtool

updated 6.8 years ago by Michael Love 43k • written 6.8 years ago by hele7 ▴ 20

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1.0k

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deseq2 differential expression adjusted pvalue

updated 6.8 years ago by Michael Love 43k • written 6.8 years ago by A ▴ 40

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6.1k

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limma voom adjusted pvalue

updated 6.9 years ago by Gordon Smyth 51k • written 6.9 years ago by b.nota ▴ 370

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805

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deseq2 adjusted pvalue

updated 7.0 years ago by Michael Love 43k • written 7.0 years ago by lirongrossmann ▴ 80

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1.7k

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deseq2 adjusted pvalue

updated 7.1 years ago by Michael Love 43k • written 7.1 years ago by hs.lansdell ▴ 20

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1.5k

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edger adjusted pvalue

updated 7.6 years ago by Aaron Lun ★ 28k • written 7.6 years ago by Nik McPherson • 0

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1.8k

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deseq2 adjusted pvalue

updated 7.9 years ago by Michael Love 43k • written 7.9 years ago by pkachroo ▴ 10

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11k

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pvalue adjusted pvalue r bonferroni rna-seq

updated 8.1 years ago by Michael Love 43k • written 8.1 years ago by fromhj304 ▴ 10

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1.6k

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cummeRbund pvalue adjusted pvalue qvalue

updated 8.9 years ago by James W. MacDonald 67k • written 8.9 years ago by Sameet Mehta ▴ 30

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1.4k

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multtest methylation adjusted pvalue

updated 9.0 years ago by kpollard ▴ 110 • written 9.0 years ago by elhananby ▴ 10

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10k

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deseq2 adjusted pvalue

updated 9.5 years ago by Steve Lianoglou ★ 13k • written 9.5 years ago by Assa Yeroslaviz ★ 1.5k

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4.0k

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DESeq2 LogFC Adjusted pvalue

updated 9.9 years ago by Michael Love 43k • written 9.9 years ago by madal • 0

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Answer: Deseq2 res Function by Michael Love 43k

> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…

Answer: ANOVA like approach of edgeR by Gordon Smyth 51k

You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…

Answer: Create Illmina bead summary data by Gordon Smyth 51k

GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…

Comment: Help with RSEM counts: do I transpose matrix? by NB • 0

OK thank you.

Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k

You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.

Votes

Answer: Deseq2 res Function

Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification

Answer: ANOVA like approach of edgeR

Comment: ANOVA like approach of edgeR

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